Infantile fibrosarcoma

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Soft Tissue and Bone Tumours (Who Classification, 5th ed.)

(General Instructions – The focus of these pages is the clinically significant genetic alterations in each disease type. This is based on up-to-date knowledge from multiple resources such as PubMed and the WHO classification books. The CCGA is meant to be a supplemental resource to the WHO classification books; the CCGA captures in a continually updated wiki-stye manner the current genetics/genomics knowledge of each disease, which evolves more rapidly than books can be revised and published. If the same disease is described in multiple WHO classification books, the genetics-related information for that disease will be consolidated into a single main page that has this template (other pages would only contain a link to this main page). Use HUGO-approved gene names and symbols (italicized when appropriate), HGVS-based nomenclature for variants, as well as generic names of drugs and testing platforms or assays if applicable. Please complete tables whenever possible and do not delete them (add N/A if not applicable in the table and delete the examples); to add (or move) a row or column in a table, click nearby within the table and select the > symbol that appears. Please do not delete or alter the section headings. The use of bullet points alongside short blocks of text rather than only large paragraphs is encouraged. Additional instructions below in italicized blue text should not be included in the final page content. Please also see Author_Instructions and FAQs as well as contact your Associate Editor or Technical Support.)

Primary Author(s)*

Kathleen Schieffer, PhD, FACMG

WHO Classification of Disease

Structure Disease
Book Soft Tissue and Bone Tumours (5th ed.)
Category Soft tissue tumours
Family Fibroblastic and myofibroblastic tumours
Type Infantile fibrosarcoma
Subtype(s) N/A

Related Terminology

Acceptable Congenital fibrosarcoma; infantile fibrosarcoma-like tumour; cellular congenital mesoblastic nephroma
Not Recommended N/A

Gene Rearrangements

Put your text here and fill in the table (Instructions: Details on clinical significance such as prognosis and other important information can be provided in the notes section. Please include references throughout the table. Do not delete the table.)

Driver Gene Fusion(s) and Common Partner Genes Molecular Pathogenesis Typical Chromosomal Alteration(s) Prevalence -Common >20%, Recurrent 5-20% or Rare <5% (Disease) Diagnostic, Prognostic, and Therapeutic Significance - D, P, T Established Clinical Significance Per Guidelines - Yes or No (Source) Clinical Relevance Details/Other Notes
NTRK3 ETV6 In-frame fusion that results in constitutive activation of the NTRK3 tyrosine kinase domain through heterodimerization and transphosphorylation of the helix-loop-helix domain of ETV6.[1] Breakpoints typically involve exon 5 of ETV6 (NM_001987.4) and exons 14 or 15 of NTRK3 (NM_001243101.1).[2] t(12;15)(p13;q25) Common D, T Yes (WHO, NCCN) The ETV6::NTRK3 fusion [t(12;15)] is diagnostic of infantile fibrosarcoma in the appropriate morphology and clinical context.[2][3][4][5] This fusion is found in the majority of infantile fibrosarcoma cases. Studies have demonstrated that this fusion is sensitive to TRK inhibitors.[6][7][8][9][10]
NTRK3 EML4 In-frame fusion that is predicted to result in constitutive activation of the NTRK3 tyrosine kinase domain through autodimerization of EML4.[1] Breakpoints typically involve exon 2 of EML4 (NM_0019063.4) and exons 14 of NTRK3 (NM_001243101.1).[2] None Recurrent D, T Yes (WHO) The EML4::NTRK3 fusion is diagnostic of infantile fibrosarcoma in the appropriate morphology and clinical context.[2][4][11][12] Studies have demonstrated that this fusion is sensitive to TRK inhibitors.[7][9][10]
NTRK1 LMNA, TPM3, SQSTM1, MIR584F1 In-frame fusion that is predicted to result in constitutive activation of the NTRK1 tyrosine kinase domain likely through dimerization of the 5' fusion partner.[1] None Recurrent D, T Yes (WHO) NTRK1 fusions may be diagnostic of infantile fibrosarcoma in the appropriate morphology and clinical context.[11][12][13] Studies have demonstrated that NTRK1 fusions are sensitive to TRK inhibitors.[7][8][9][10]
NTRK3 SPECC1L In-frame fusion that results in constitutive activation of the NTRK3 tyrosine kinase through heterodimerization and transphosphorylation of the SMC (structural maintenance of chromosomes) domain of SPECC1L. In this case, the breakpoint was in exon 9 of SPECC1L (NM_015330) and exon 13 of NTRK3 (NM_002530) and encompassed the entire tyrosine kinase domain of NTRK3.[14] None Rare D, T No A SPECC1L::NTRK3 fusion was reported in a single individual with a large infantile fibrosarcoma of the chest wall. The patient was treated with a TRK inhibitor with excellent clinical response.[14]
BRAF PT7, CUX1 None Rare No
BRAF Deletion of CR1 domain and tandem duplication within exon 2 Intragenic gene rearrangement that is predicted to result in a constitutively active form of BRAF due to loss of the negative regulatory Ras-binding domain.[4] None Rare No
RET CLIP2, MYH10 None Rare No
MET TFG In-frame fusion that is predicted to result in constitutive action of the MET tyrosine kinase domain through dimerization of the TFG dimerization domains. In this case, the breakpoint was in exon 7 of TFG and exon 15 of MET and encompassed the entire tyrosine kinase domain of MET.[15] None Rare D Yes (WHO) A TFG::MET fusion was reported in a single individual with an unusual infantile spindle cell sarcoma that morphologically resembled infantile fibrosarcoma. MET IHC showed diffuse expression with moderate intensity and RNA expression analysis indicated an intermediate overexpression of MET.[15]

Individual Region Genomic Gain/Loss/LOH

Whole chromosome gain of 8, 11, 17, and 20 (in various combinations) are commonly observed in infantile fibrosarcoma.

Chr # Gain, Loss, Amp, LOH Minimal Region Cytoband and/or Genomic Coordinates [Genome Build; Size] Relevant Gene(s) Diagnostic, Prognostic, and Therapeutic Significance - D, P, T Established Clinical Significance Per Guidelines - Yes or No (Source) Clinical Relevance Details/Other Notes
8 Gain Whole chromosome 8 Unknown D No Whole chromosome gain of 8 is commonly observed in infantile fibrosarcoma.[2][5][11][16]
11 Gain Whole chromosome 11 Unknown D No Whole chromosome gain of 11 is commonly observed in infantile fibrosarcoma.[2][5][11][16]
17 Gain Whole chromosome 17 Unknown D No Whole chromosome gain of 17 is commonly observed in infantile fibrosarcoma.[2][5][11][16]
20 Gain Whole chromosome 20 Unknown D No Whole chromosome gain of 20 is commonly observed in infantile fibrosarcoma.[2][5][11][16]

Characteristic Chromosomal or Other Global Mutational Patterns

None

Chromosomal Pattern Molecular Pathogenesis Prevalence -

Common >20%, Recurrent 5-20% or Rare <5% (Disease)

Diagnostic, Prognostic, and Therapeutic Significance - D, P, T Established Clinical Significance Per Guidelines - Yes or No (Source) Clinical Relevance Details/Other Notes

Gene Mutations (SNV/INDEL)

None

Gene Genetic Alteration Tumor Suppressor Gene, Oncogene, Other Prevalence -

Common >20%, Recurrent 5-20% or Rare <5% (Disease)

Diagnostic, Prognostic, and Therapeutic Significance - D, P, T   Established Clinical Significance Per Guidelines - Yes or No (Source) Clinical Relevance Details/Other Notes

Note: A more extensive list of mutations can be found in cBioportal, COSMIC, and/or other databases. When applicable, gene-specific pages within the CCGA site directly link to pertinent external content.

Epigenomic Alterations

None

Genes and Main Pathways Involved

Put your text here and fill in the table (Instructions: Please include references throughout the table. Do not delete the table.)

Gene; Genetic Alteration Pathway Pathophysiologic Outcome
NTRK1/2/3; Activating fusion RAS/MAPK signaling Increased cell growth and proliferation

Genetic Diagnostic Testing Methods

  • Fusion testing
    • Targeted sequencing (such as RT-PCR or targeted next-generation sequencing (NGS) panels)
      • For targeted NGS panels, consider if the assay requires both gene partners to be included on the panel or if it is able to identify novel fusions as long as one of the partners is included on the panel
    • Whole transcriptome RNA-sequencing
      • Provides an unbiased approach to fusion calling
  • Fluorescence in situ hybridization (FISH)
    • Break apart probes for ETV6 and/or NTRK3 will identify a rearrangement (ETV6::NTRK3) present in the majority of infantile fibrosarcoma. Consider other fusion partners is ETV6 FISH is negative.
  • Karyotyping
    • Can identify the t(12;15) rearrangement as well as other commonly reported aneusomies (i.e. whole chromosome gains of 8, 11, 17, 20)
  • DNA sequencing
    • Can identify the commonly reported aneusomies if copy number variant calling is performed
    • Currently, there are no recurrently described somatic SNV/indels for infantile fibrosarcoma

Familial Forms

None

Additional Information

None

Links

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References

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Notes

*Primary authors will typically be those that initially create and complete the content of a page.  If a subsequent user modifies the content and feels the effort put forth is of high enough significance to warrant listing in the authorship section, please contact the Associate Editor or other CCGA representative.  When pages have a major update, the new author will be acknowledged at the beginning of the page, and those who contributed previously will be acknowledged below as a prior author.

Prior Author(s): *Citation of this Page: “Infantile fibrosarcoma”. Compendium of Cancer Genome Aberrations (CCGA), Cancer Genomics Consortium (CGC), updated 09/5/2025, https://ccga.io/index.php/STBT5:Infantile fibrosarcoma.

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  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Church, Alanna J.; et al. (2018-03). "Recurrent EML4-NTRK3 fusions in infantile fibrosarcoma and congenital mesoblastic nephroma suggest a revised testing strategy". Modern Pathology: An Official Journal of the United States and Canadian Academy of Pathology, Inc. 31 (3): 463–473. doi:10.1038/modpathol.2017.127. ISSN 1530-0285. PMID 29099503. Check date values in: |date= (help)
  3. Caldwell, Kenneth J.; et al. (2020-09). "A newborn with a large NTRK fusion positive infantile fibrosarcoma successfully treated with larotrectinib". Pediatric Blood & Cancer. 67 (9): e28330. doi:10.1002/pbc.28330. ISSN 1545-5017. PMID 32452122 Check |pmid= value (help). Check date values in: |date= (help)
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  6. Cardesa-Salzmann, Teresa M.; et al. (2025-05). "On TRacK With Larotrectinib in a Neonate With a Giant Congenital ETV6::NTRK3 Fusion-Positive Infantile Fibrosarcoma of the Head and Neck". Head & Neck. 47 (5): E50–E57. doi:10.1002/hed.28058. ISSN 1097-0347. PMC 12038221 Check |pmc= value (help). PMID 39737858 Check |pmid= value (help). Check date values in: |date= (help)
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  10. 10.0 10.1 10.2 Laetsch, Theodore W.; et al. (2025-04). "Larotrectinib for Newly Diagnosed Infantile Fibrosarcoma and Other Pediatric NTRK Fusion-Positive Solid Tumors (Children's Oncology Group ADVL1823)". Journal of Clinical Oncology: Official Journal of the American Society of Clinical Oncology. 43 (10): 1188–1197. doi:10.1200/JCO-24-01854. ISSN 1527-7755. PMC 11954674 Check |pmc= value (help). PMID 39652801 Check |pmid= value (help). Check date values in: |date= (help)
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