Compendium of Cancer Genome Aberrations

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'''Welcome to the Compendium of Cancer Genome Aberrations (CCGA)! The CCGA is a collaborative effort to document and describe chromosome and other genomic abnormalities in cancer. The Wiki style interface allows for real-time editing and content sharing within our genetics community. This resource is supported by the [http://www.cancergenomics.org Cancer Genomics Consortium (CGC)] and others with an interest in clinical cytogenetics, molecular genetics and genomics in cancer. [Mailto:CCGA@cancergenomics.org|Contact Contact us] for more information and meet our editorial [[Leadership]].'''
'''Welcome to the CCGA!'''
 
'''Join us! To become an author, please complete a few brief questions on our [https://mms.cancergenomics.org/members/form.php?orgcode=CGC&fid=3830649 Volunteer Form]'''.
{{Box-round|title=Join Us!|titlebackground=#06B5AD|Join us! To become an author, please complete a few brief questions on our Volunteer Form.
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{{Box-round|title=New Items: Video Tutorial and Author Instructions!|titlebackground=#06B5AD|We've created a video tutorial demonstrating how to add content to the CCGA. You can find this '''Video Tutorial''' [[Video_Tutorial|here]]. Please also refer to helpful '''Author Instructions''' [[Author Instructions|here]].
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[[File:WHO Heme and Lymphoid.jpg|thumb|link=Acute_Myeloid_Leukemia_(AML)_and_Related_Precursor_Neoplasms|The AML page has nearly been completed! Click the link above to view it!]]
[[File:Circos.png|100px|link=Main_Page]] '''Cancer Genomes''' [[Hematologic and Lymphoid]] | [[Solid Tumors]] | [[CNS]] | [[Pediatric]]
 
 
[[File:Inv 16 pathology.png |100px|link=:Category:Diseases]] '''Diseases''' '''[[:Category:Diseases A|A]]'''
| '''[[:Category:Diseases B|B]]''' | '''[[:Category:Diseases C|C]]''' | '''[[:Category:Diseases D|D]]''' | '''[[:Category:Diseases E|E]]''' | '''[[:Category:Diseases F|F]]'''
| '''[[:Category:Diseases G|G]]''' | '''[[:Category:Diseases H|H]]''' | '''[[:Category:Diseases I|I]]''' | '''[[:Category:Diseases J|J]]''' | '''[[:Category:Diseases K|K]]''' | '''[[:Category:Diseases L|L]]''' | '''[[:Category:Diseases M|M]]''' | '''[[:Category:Diseases N|N]]''' | '''[[:Category:Diseases O|O]]''' | '''[[:Category:Diseases P|P]]''' | '''[[:Category:Diseases Q|Q]]''' | '''[[:Category:Diseases R|R]]''' | '''[[:Category:Diseases S|S]]''' | '''[[:Category:Diseases T|T]]''' | '''[[:Category:Diseases U|U]]'''
| '''[[:Category:Diseases V|V]]''' | '''[[:Category:Diseases W|W]]''' | '''[[:Category:Diseases X|X]]''' | '''[[:Category:Diseases Y|Y]]''' | '''[[:Category:Diseases Z|Z]]'''
 
 
[[File:Example_translocation.png|100px|link=:Category:Structural Abnormalities]] '''Structural Abnormalities''' '''[[:Category:Structural Abnormalities Chromosome 1|1]]'''
| '''[[:Category:Structural Abnormalities Chromosome 2|2]]''' | '''[[:Category:Structural Abnormalities Chromosome 3|3]]''' | '''[[:Category:Structural Abnormalities Chromosome 4|4]]'''
| '''[[Structural Abnormalities Chromosome 5|5]]''' | '''[[:Category:Structural Abnormalities Chromosome 6|6]]'''
| '''[[:Category:Structural Abnormalities Chromosome 7|7]]''' | '''[[:Category:Structural Abnormalities Chromosome 8|8]]''' | '''[[:Category:Structural Abnormalities Chromosome 9|9]]'''
| '''[[:Category:Structural Abnormalities Chromosome 10|10]]''' | '''[[:Category:Structural Abnormalities Chromosome 11|11]]''' | '''[[Structural Abnormalities Chromosome 12|12]]'''
| '''[[:Category:Structural Abnormalities Chromosome 13|13]]''' | '''[[Structural Abnormalities Chromosome 14|14]]''' | '''[[:Category:Structural Abnormalities Chromosome 15|15]]'''
| '''[[:Category:Structural Abnormalities Chromosome 16|16]]''' | '''[[Structural Abnormalities Chromosome 17|17]]''' | '''[[:Category:Structural Abnormalities Chromosome 18|18]]'''
| '''[[Structural Abnormalities Chromosome 19|19]]''' | '''[[:Category:Structural Abnormalities Chromosome 20|20]]''' | '''[[:Category:Structural Abnormalities Chromosome 21|21]]'''
| '''[[Structural Abnormalities Chromosome 22|22]]''' | '''[[:Category:Structural Abnormalities Chromosome X|X]]''' | '''[[:Category:Structural Abnormalities Chromosome Y|Y]]'''
 
 
[[File:Example_CNA.png|100px|link=:Category:Copy Number Abnormalities]] '''Copy Number Abnormalities''' '''[[:Category:Copy Number Abnormalities Chromosome 1|1]]'''
| '''[[:Category:Copy Number Abnormalities Chromosome 2|2]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 3|3]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 4|4]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 5|5]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 6|6]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 7|7]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 8|8]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 9|9]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 10|10]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 11|11]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 12|12]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 13|13]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 14|14]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 15|15]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 16|16]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 17|17]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 18|18]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 19|19]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 20|20]]'''
| '''[[:Category:Copy Number Abnormalities Chromosome 21|21]]''' | '''[[:Category:Copy Number Abnormalities Chromosome 22|22]]''' | '''[[:Category:Copy Number Abnormalities Chromosome X|X]]''' | '''[[:Category:Copy Number Abnormalities Chromosome Y|Y]]'''


*An open resource focused on describing clinically relevant chromosomal and genomic abnormalities in cancer​
*Intended as a companion resource to the [https://tumourclassification.iarc.who.int/welcome/ WHO Classification of Tumours (WCT)] book series​
*Provides clinically significant genetic information for entities based on the current WCT disease ontology​
*Supported by the [https://www.cancergenomics.org/ Cancer Genomics Consortium (CGC)] and in collaboration with [https://whobluebooks.iarc.fr/about/ IARC] (publisher of the WCT book series)​
*Crowdsourced using a wiki-style interface, allowing for real-time editing and content sharing ​
*Contributed to by colleagues with an interest in clinical cytogenetics, molecular genetics and genomics in cancer ([https://mms.cancergenomics.org/members/form.php?orgcode=CGC&fid=3830649 Volunteer Form])


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{{Box-round|titleforeground=white|titlebackground=#003399|title=Search Content Structured Based on the WHO Classification of Tumours (click book images below)|view-link=MediaWiki|content= Reference: [WHO Classification of Tumours.|Reference: [https://tumourclassification.iarc.who.int/welcome/ WHO Classification of Tumours.] The hierarchical tumour classification structure is reproduced with permission from the copyright holder, [https://whobluebooks.iarc.fr/about/ ©International Agency for Research on Cancer.]}}<div style="
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[[File:Fish_zoomed.png|100px|link=:Category:Cancer Genes]] '''Cancer Genes''' '''[[:Category:Cancer Genes A|A]]'''
| '''[[:Category:Cancer Genes B|B]]''' | '''[[:Category:Cancer Genes C|C]]''' | '''[[:Category:Cancer Genes D|D]]''' | '''[[:Category:Cancer Genes E|E]]''' | '''[[:Category:Cancer Genes F|F]]'''
| '''[[:Category:Cancer Genes G|G]]''' | '''[[:Category:Cancer Genes H|H]]''' | '''[[:Category:Cancer Genes I|I]]''' | '''[[:Category:Cancer Genes J|J]]''' | '''[[:Category:Cancer Genes K|K]]''' | '''[[:Category:Cancer Genes L|L]]''' | '''[[:Category:Cancer Genes M|M]]''' | '''[[:Category:Cancer Genes N|N]]''' | '''[[:Category:Cancer Genes O|O]]''' | '''[[:Category:Cancer Genes P|P]]''' | '''[[:Category:Cancer Genes Q|Q]]''' | '''[[:Category:Cancer Genes R|R]]''' | '''[[:Category:Cancer Genes S|S]]''' | '''[[:Category:Cancer Genes T|T]]''' | '''[[:Category:Cancer Genes U|U]]'''
| '''[[:Category:Cancer Genes V|V]]''' | '''[[:Category:Cancer Genes W|W]]''' | '''[[:Category:Cancer Genes X|X]]''' | '''[[:Category:Cancer Genes Y|Y]]''' | '''[[:Category:Cancer Genes Z|Z]]'''




<br>
[[File:CGC logo only.png|100px|link=Main_Page]]<span id="fp-span-cgc-pre"> '''CGC Workgroups Recurrent Loci Tables'''</span><span id="fp-span-cgc" style="display: block; margin-top: -62px; margin-left: 385px;"> [[AML Table: Recurrent Genomic Alterations Detected by Chromosomal Microarray|AML]] | [[MDS, MDS/MPN and MPN Tables: Recurrent Genomic Alterations Detected by Chromosomal Microarray|MDS/MPN]] | [[CLL Tables: Regions of Recurrent Copy Number Change and CN-LOH|CLL]] | [[Recurrent Genomic Alterations in Pediatric and Adult Central Nervous System Tumors Detected by Chromosomal Microarray|CNS Tumors]] | [[Plasma Cell Neoplasms Tables: Recurrent Cytogenomic Alterations|Plasma Cell Neoplasms]] | [[Breast Cancer: Recurrent Genomic Alterations|Breast Cancer]] | [[Renal Cell Neoplasia Tables: Recurrent Cytogenomic Alterations|Renal Neoplasia]] | [[B-ALL Tables: Prognostic Genomic Abnormalities and Recurrent Gene Fusions|B-ALL]]</span>
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[[Acute Myeloid Leukemia (AML) with t(8;21)(q22;q22.1); RUNX1-RUNX1T1|Example Article]]


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