HAEM5:Acute myeloid leukaemia with BCR::ABL1 fusion: Difference between revisions

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|chr7
|chr7
|''IKZF1,'' TR Beta Chain (TRB) genes<!-- Pls advice if this is correct, thx -->
|''IKZF1,'' TR Beta Chain (TRB) genes<!-- Pls advice if this is correct, thx -->
|D,P  
|D,P
|No
|No
|Presence of monosomy 7 (or 7q deletion) is sufficient for a diagnosis of AML with MDS-related changes when there is ≥20% blasts and no prior therapy (add reference).  Monosomy 7/7q deletion is associated with a poor prognosis in AML<ref name=":6" />.
|Presence of monosomy 7 (or 7q deletion) is sufficient for a diagnosis of AML with MDS-related changes when there is ≥20% blasts and no prior therapy (add reference).  Monosomy 7/7q deletion is associated with a poor prognosis in AML<ref name=":6" />.
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|chr8
|chr8
|Unknown
|Unknown
|D,P  
|D,P
|No
|No
|Common recurrent secondary finding for t(8;21)<ref>{{Cite journal|last=Jakovic|first=Ljubomir|last2=Fekete|first2=Marija Dencic|last3=Virijevic|first3=Marijana|last4=Kurtovic|first4=Nada Kraguljac|last5=Todoric-Zivanovic|first5=Biljana|last6=Stamatovic|first6=Dragana|last7=Karan-Djurasevic|first7=Teodora|last8=Pavlovic|first8=Sonja|last9=Lekovic|first9=Danijela|date=2022-09-01|title=De novo acute myeloid leukemia harboring concomitant t(8;21)(q22;q22);RUNX1::RUNX1T1 and BCR::ABL1 (p190 minor transcript)|url=https://link.springer.com/article/10.1007/s12308-022-00509-4|journal=Journal of Hematopathology|language=en|volume=15|issue=3|pages=191–195|doi=10.1007/s12308-022-00509-4|issn=1865-5785}}</ref><ref>{{Cite journal|last=Singh|first=Manish K.|last2=Gupta|first2=Ruchi|last3=Rahman|first3=Khaliqur|last4=Kumar|first4=Sanjeev|last5=Sharma|first5=Akhilesh|last6=Nityanand|first6=Soniya|date=2017-03-01|title=Co-existence of AML1-ETO and BCR-ABL1 transcripts in a relapsed patient of acute myeloid leukemia with favorable risk group: A coincidence or clonal evolution?|url=https://www.sciencedirect.com/science/article/pii/S1658387616000054|journal=Hematology/Oncology and Stem Cell Therapy|volume=10|issue=1|pages=39–41|doi=10.1016/j.hemonc.2015.12.003|issn=1658-3876}}</ref>.
|Common recurrent secondary finding for t(8;21)<ref>{{Cite journal|last=Jakovic|first=Ljubomir|last2=Fekete|first2=Marija Dencic|last3=Virijevic|first3=Marijana|last4=Kurtovic|first4=Nada Kraguljac|last5=Todoric-Zivanovic|first5=Biljana|last6=Stamatovic|first6=Dragana|last7=Karan-Djurasevic|first7=Teodora|last8=Pavlovic|first8=Sonja|last9=Lekovic|first9=Danijela|date=2022-09-01|title=De novo acute myeloid leukemia harboring concomitant t(8;21)(q22;q22);RUNX1::RUNX1T1 and BCR::ABL1 (p190 minor transcript)|url=https://link.springer.com/article/10.1007/s12308-022-00509-4|journal=Journal of Hematopathology|language=en|volume=15|issue=3|pages=191–195|doi=10.1007/s12308-022-00509-4|issn=1865-5785}}</ref><ref>{{Cite journal|last=Singh|first=Manish K.|last2=Gupta|first2=Ruchi|last3=Rahman|first3=Khaliqur|last4=Kumar|first4=Sanjeev|last5=Sharma|first5=Akhilesh|last6=Nityanand|first6=Soniya|date=2017-03-01|title=Co-existence of AML1-ETO and BCR-ABL1 transcripts in a relapsed patient of acute myeloid leukemia with favorable risk group: A coincidence or clonal evolution?|url=https://www.sciencedirect.com/science/article/pii/S1658387616000054|journal=Hematology/Oncology and Stem Cell Therapy|volume=10|issue=1|pages=39–41|doi=10.1016/j.hemonc.2015.12.003|issn=1658-3876}}</ref>.
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Additional chromosomal aberrations are infrequently seen in BCR-ABL AML, it has been described together with different class II aberrations such as CBFB-MYH11, RUNX1- RUNX1T1 and PML-RARA<ref name=":2" />. In AML, BCR-ABL1 seems to cooperate with several AML-specific aberrations such as inv(16), t(8;21) and myelodysplasia-related cytogenetic aberrations<ref name=":2" /><ref>{{Cite journal|last=Bacher|first=Ulrike|last2=Haferlach|first2=Torsten|last3=Alpermann|first3=Tamara|last4=Zenger|first4=Melanie|last5=Hochhaus|first5=Andreas|last6=Beelen|first6=Dietrich W.|last7=Uppenkamp|first7=Michael|last8=Rummel|first8=Mathias|last9=Kern|first9=Wolfgang|date=2011|title=Subclones with the t(9;22)/BCR-ABL1 rearrangement occur in AML and seem to cooperate with distinct genetic alterations|url=https://www.ncbi.nlm.nih.gov/pubmed/21275954|journal=British Journal of Haematology|volume=152|issue=6|pages=713–720|doi=10.1111/j.1365-2141.2010.08472.x|issn=1365-2141|pmid=21275954}}</ref>. (For diagnostic purpose, note that inv(16) is not restricted to AML and can also be found in CML-MBC). Additional chromosomal aberrations, such as an additional Ph chromosome, trisomy 19 and isochromosome 17q seen in CML MBP are infrequently seen in AML with ''BCR::ABL1.''
Additional chromosomal aberrations are infrequently seen in BCR-ABL AML, it has been described together with different class II aberrations such as CBFB-MYH11, RUNX1- RUNX1T1 and PML-RARA<ref name=":12" /><ref name=":2" />. In AML, BCR-ABL1 seems to cooperate with several AML-specific aberrations such as inv(16), t(8;21) and myelodysplasia-related cytogenetic aberrations<ref name=":2" /><ref name=":12">{{Cite journal|last=Bacher|first=Ulrike|last2=Haferlach|first2=Torsten|last3=Alpermann|first3=Tamara|last4=Zenger|first4=Melanie|last5=Hochhaus|first5=Andreas|last6=Beelen|first6=Dietrich W.|last7=Uppenkamp|first7=Michael|last8=Rummel|first8=Mathias|last9=Kern|first9=Wolfgang|date=2011|title=Subclones with the t(9;22)/BCR-ABL1 rearrangement occur in AML and seem to cooperate with distinct genetic alterations|url=https://www.ncbi.nlm.nih.gov/pubmed/21275954|journal=British Journal of Haematology|volume=152|issue=6|pages=713–720|doi=10.1111/j.1365-2141.2010.08472.x|issn=1365-2141|pmid=21275954}}</ref>. (For diagnostic purpose, note that inv(16) is not restricted to AML and can also be found in CML-MBC). Additional chromosomal aberrations, such as an additional Ph chromosome, trisomy 19 and isochromosome 17q seen in CML MBP are infrequently seen in AML with ''BCR::ABL1.''
{| class="wikitable sortable"
{| class="wikitable sortable"
|-
|-
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|inv(16)(p13.1q22) or t(16;16)(p13.1;q22)
|inv(16)(p13.1q22) or t(16;16)(p13.1;q22)
|CBFB::MYH11 fusion
|CBFB::MYH11 fusion
|
|Rare (BCR-ABL1 AML)
|
|D,P
|
|No
|
|The rarity of Philadelphia-positive subclones in AML patients with specific genetic lesions requires more cases for conclusive prognosis and therapeutic insights<ref name=":12" />.
|-
|-
|t(8;21)(q22;q22.1)  
|t(8;21)(q22;q22.1)
|RUNX1- RUNX1T1
|RUNX1- RUNX1T1
|
|Rare (BCR-ABL1 AML)
|
|D,P
|
|No
|
|The rarity of Philadelphia-positive subclones in AML patients with specific genetic lesions requires more cases for conclusive prognosis and therapeutic insights<ref name=":12" />.
|-
|-
|t(15;17)(q13.4;q21.2)
|t(15;17)(q13.4;q21.2)
|PML-RARA
|PML-RARA
|
|Rare (BCR-ABL1 AML)
|
|D,P
|
|No
|
|The rarity of Philadelphia-positive subclones in AML patients with specific genetic lesions requires more cases for conclusive prognosis and therapeutic insights<ref name=":12" />.
|-
|-
|AML-myelodysplasia-related (AML-MR) cytogenetic aberrations:
|AML-myelodysplasia-related (AML-MR) cytogenetic aberrations:
Complex karyotype (>3 abnormalities)  
del(5q), t(5q)  


del(5q), t(5q)  
inv(3)(q21q26)


• ‐7, del(7q)  
• ‐7, del(7q)  
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• idic(X)(q13)
• idic(X)(q13)
|
|Unknown
|
|Rare (BCR-ABL1 AML)
|
|D,P
|
|No
|
|The rarity of Philadelphia-positive subclones in AML patients with specific genetic lesions requires more cases for conclusive prognosis and therapeutic insights<ref name=":12" />.
 
In AML, BCR-ABL appears to interact with specific aberrations like inv(16) and myelodysplasia-related cytogenetic changes, but the mechanisms of disease initiation and cooperation remain unclear<ref name=":2" />.
|}<br />
|}<br />
==Gene Mutations (SNV/INDEL)==
==Gene Mutations (SNV/INDEL)==


* ''RUNX1'' mutation is common in AML with ''BCR::ABL1'' and occurs in ~40% of cases (Genes Chromosomes Cancer 2021;60:426)
*''RUNX1'' mutation is common in AML with ''BCR::ABL1'' and occurs in ~40% of cases (Genes Chromosomes Cancer 2021;60:426)
* Mutations of ''NPM1, FLT3'' or ''DNMT3A'' are not commonly detected (Genes Chromosomes Cancer 2021;60:426)
*Mutations of ''NPM1, FLT3'' or ''DNMT3A'' are not commonly detected (Genes Chromosomes Cancer 2021;60:426)
* Other mutated genes include ''ASXL1, BCOR, IDH1 / IDH2'' and ''SRSF2''; each of these occur in 10 - 15% of cases (Leuk Lymphoma 2013;54:138, Leukemia 2017;31:2211, Genes Chromosomes Cancer 2021;60:426)
*Other mutated genes include ''ASXL1, BCOR, IDH1 / IDH2'' and ''SRSF2''; each of these occur in 10 - 15% of cases (Leuk Lymphoma 2013;54:138, Leukemia 2017;31:2211, Genes Chromosomes Cancer 2021;60:426)