HAEM5:Myelodysplastic/myeloproliferative neoplasm with SF3B1 mutation and thrombocytosis: Difference between revisions

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<blockquote class='blockedit'>{{Box-round|title=v4:Clinical Features|The content below was from the old template. Please incorporate above.}}
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Symptoms and clinical features are related to anemia, iron overload and thrombocytosis. Thrombocytemia manifests with thrombosis/hemorrhage. Differential diagnosis for thrombocytosis is Essential Thromocytopenia (ET) or reactive thrombocytosis.  
Symptoms and clinical features are related to anemia, iron overload and thrombocytosis. Thrombocytemia manifests with thrombosis/hemorrhage. Differential diagnosis for thrombocytosis is Essential Thromocytopenia (ET) or reactive thrombocytosis.  
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Ring sideroblasts are abnormal erythroid lineage precursors with increased mitochondrial iron deposits forming siderotic granules. A minimum of five distinct siderotic granules must be present, involving at least one third of the nuclear circumference.
Ring sideroblasts are abnormal erythroid lineage precursors with increased mitochondrial iron deposits forming siderotic granules. A minimum of five distinct siderotic granules must be present, involving at least one third of the nuclear circumference.


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==Sites of Involvement==
==Sites of Involvement==
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No chromosomal rearrangements for MDS/MPN-RS-T
No chromosomal rearrangements for MDS/MPN-RS-T
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* Individual Region Genomic Gain/Loss/LOH
* Individual Region Genomic Gain/Loss/LOH
* Characteristic Chromosomal Patterns
* Characteristic Chromosomal Patterns
* Gene Mutations (SNV/INDEL)}}
* Gene Mutations (SNV/INDEL)}}</blockquote>


The presence of SF3B1 and JAK2 mutations is correlated with better prognosis and longer survival. Mutations in ASXL1, SETBP1 and EZH2 have negative prognostic significance <ref name=":2" /><ref name=":3" />. Abnormal karyotypes, although rare, correlate with very poor outcome <ref name=":3" />. Disease outcome: overall survival is better than in patients with MDS-RS-SLD, but worse than in patients with MPN-ET. There is low risk of converging to leukemic forms.<ref name=":0" /><ref name=":2" />
The presence of SF3B1 and JAK2 mutations is correlated with better prognosis and longer survival. Mutations in ASXL1, SETBP1 and EZH2 have negative prognostic significance <ref name=":2" /><ref name=":3" />. Abnormal karyotypes, although rare, correlate with very poor outcome <ref name=":3" />. Disease outcome: overall survival is better than in patients with MDS-RS-SLD, but worse than in patients with MPN-ET. There is low risk of converging to leukemic forms.<ref name=":0" /><ref name=":2" />
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Treatment: transfusions, recombinant human erythropoietin for anemia. The use of Lenalidomide is controversial, while,  the use of Luspatercept- a novel erythroid maturation agent is not an established treatment option. Aspirin for thrombocytosis. Hydroxyurea is the preferred  cytoreductive agent <ref name=":2" />
Treatment: transfusions, recombinant human erythropoietin for anemia. The use of Lenalidomide is controversial, while,  the use of Luspatercept- a novel erythroid maturation agent is not an established treatment option. Aspirin for thrombocytosis. Hydroxyurea is the preferred  cytoreductive agent <ref name=":2" />


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==Individual Region Genomic Gain / Loss / LOH==
==Individual Region Genomic Gain / Loss / LOH==
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No genomic gain/loss for MDS/MPN-RS-T
No genomic gain/loss for MDS/MPN-RS-T
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==Characteristic Chromosomal Patterns==
==Characteristic Chromosomal Patterns==
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No recurrent chromosomal aberrations for MDS/MPN-RS-T. However, abnormalities have been reported in 10% of patients. Trisomy 8 and loss of Y are the most common changes.<ref name=":3" />  
No recurrent chromosomal aberrations for MDS/MPN-RS-T. However, abnormalities have been reported in 10% of patients. Trisomy 8 and loss of Y are the most common changes.<ref name=":3" />  


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==Gene Mutations (SNV / INDEL)==
==Gene Mutations (SNV / INDEL)==
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The presence of concomitant  mutations in SF3B1 and JAK2 V617F support the diagnosis of MDS/MPN-RS-T; less commonly encountered are SF3B1 and CALR or SF3B1 and MPL <ref>{{Cite journal|last=S|first=Jeromin|last2=T|first2=Haferlach|last3=S|first3=Weissmann|last4=M|first4=Meggendorfer|last5=C|first5=Eder|last6=N|first6=Nadarajah|last7=T|first7=Alpermann|last8=A|first8=Kohlmann|last9=W|first9=Kern|date=2015|title=Refractory anemia with ring sideroblasts and marked thrombocytosis cases harbor mutations in SF3B1 or other spliceosome genes accompanied by JAK2V617F and ASXL1 mutations|url=https://pubmed.ncbi.nlm.nih.gov/25527566/|language=en|doi=10.3324/haematol.2014.119032|pmc=PMC4380732|pmid=25527566}}</ref><ref name=":3">{{Cite journal|last=L|first=Palomo|last2=M|first2=Meggendorfer|last3=S|first3=Hutter|last4=S|first4=Twardziok|last5=V|first5=Adema|last6=I|first6=Fuhrmann|last7=F|first7=Fuster-Tormo|last8=B|first8=Xicoy|last9=L|first9=Zamora|date=2020|title=Molecular landscape and clonal architecture of adult myelodysplastic/myeloproliferative neoplasms|url=https://pubmed.ncbi.nlm.nih.gov/32573691/|language=en|pmid=32573691}}</ref>.
The presence of concomitant  mutations in SF3B1 and JAK2 V617F support the diagnosis of MDS/MPN-RS-T; less commonly encountered are SF3B1 and CALR or SF3B1 and MPL <ref>{{Cite journal|last=S|first=Jeromin|last2=T|first2=Haferlach|last3=S|first3=Weissmann|last4=M|first4=Meggendorfer|last5=C|first5=Eder|last6=N|first6=Nadarajah|last7=T|first7=Alpermann|last8=A|first8=Kohlmann|last9=W|first9=Kern|date=2015|title=Refractory anemia with ring sideroblasts and marked thrombocytosis cases harbor mutations in SF3B1 or other spliceosome genes accompanied by JAK2V617F and ASXL1 mutations|url=https://pubmed.ncbi.nlm.nih.gov/25527566/|language=en|doi=10.3324/haematol.2014.119032|pmc=PMC4380732|pmid=25527566}}</ref><ref name=":3">{{Cite journal|last=L|first=Palomo|last2=M|first2=Meggendorfer|last3=S|first3=Hutter|last4=S|first4=Twardziok|last5=V|first5=Adema|last6=I|first6=Fuhrmann|last7=F|first7=Fuster-Tormo|last8=B|first8=Xicoy|last9=L|first9=Zamora|date=2020|title=Molecular landscape and clonal architecture of adult myelodysplastic/myeloproliferative neoplasms|url=https://pubmed.ncbi.nlm.nih.gov/32573691/|language=en|pmid=32573691}}</ref>.
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==Epigenomic Alterations==
==Epigenomic Alterations==
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<blockquote class='blockedit'>{{Box-round|title=v4:Genes and Main Pathways Involved|The content below was from the old template. Please incorporate above.}}</blockquote>


SF3B1 gene mutations are present in over 80% of patients <ref name=":2" />. Somatic mutation in SF3B1 leads to abnormal ABCB7 protein, accumulation of mitochondrial iron and ineffective erythropoiesis, with formation of ring sideroblasts<ref>{{Cite journal|last=M|first=Cazzola|last2=M|first2=Rossi|last3=L|first3=Malcovati|date=2013|title=Biologic and clinical significance of somatic mutations of SF3B1 in myeloid and lymphoid neoplasms|url=https://pubmed.ncbi.nlm.nih.gov/23160465/|language=en|doi=10.1182/blood-2012-09-399725|pmc=PMC3790951|pmid=23160465}}</ref>. Mutations in JAK2 correlate with increased platelet count.<ref name=":3" />  
SF3B1 gene mutations are present in over 80% of patients <ref name=":2" />. Somatic mutation in SF3B1 leads to abnormal ABCB7 protein, accumulation of mitochondrial iron and ineffective erythropoiesis, with formation of ring sideroblasts<ref>{{Cite journal|last=M|first=Cazzola|last2=M|first2=Rossi|last3=L|first3=Malcovati|date=2013|title=Biologic and clinical significance of somatic mutations of SF3B1 in myeloid and lymphoid neoplasms|url=https://pubmed.ncbi.nlm.nih.gov/23160465/|language=en|doi=10.1182/blood-2012-09-399725|pmc=PMC3790951|pmid=23160465}}</ref>. Mutations in JAK2 correlate with increased platelet count.<ref name=":3" />  


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==Genetic Diagnostic Testing Methods==
==Genetic Diagnostic Testing Methods==