Primary cutaneous CD8-positive aggressive epidermotropic cytotoxic T-cell lymphoma

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Haematolymphoid Tumours (WHO Classification, 5th ed.)

(General Instructions – The focus of these pages is the clinically significant genetic alterations in each disease type. This is based on up-to-date knowledge from multiple resources such as PubMed and the WHO classification books. The CCGA is meant to be a supplemental resource to the WHO classification books; the CCGA captures in a continually updated wiki-stye manner the current genetics/genomics knowledge of each disease, which evolves more rapidly than books can be revised and published. If the same disease is described in multiple WHO classification books, the genetics-related information for that disease will be consolidated into a single main page that has this template (other pages would only contain a link to this main page). Use HUGO-approved gene names and symbols (italicized when appropriate), HGVS-based nomenclature for variants, as well as generic names of drugs and testing platforms or assays if applicable. Please complete tables whenever possible and do not delete them (add N/A if not applicable in the table and delete the examples); to add (or move) a row or column in a table, click nearby within the table and select the > symbol that appears. Please do not delete or alter the section headings. The use of bullet points alongside short blocks of text rather than only large paragraphs is encouraged. Additional instructions below in italicized blue text should not be included in the final page content. Please also see Author_Instructions and FAQs as well as contact your Associate Editor or Technical Support.)

Primary Author(s)*

Ahmed Eladely, MBBCh. Andrew Siref, MD.

Creighton University, Omaha, NE.

WHO Classification of Disease

Structure Disease
Book Haematolymphoid Tumours (5th ed.)
Category T-cell and NK-cell lymphoid proliferations and lymphomas
Family Mature T-cell and NK-cell neoplasms
Type Primary cutaneous T-cell lymphoid proliferations and lymphomas
Subtype(s) Primary cutaneous CD8-positive aggressive epidermotropic cytotoxic T-cell lymphoma

Related Terminology

Acceptable N/A
Not Recommended Berti lymphoma; Ketron–Goodman / disseminated pagetoid reticulosis

Gene Rearrangements

In PCAETL, recurrent genomic events affecting genes involved in the cell cycle, chromatin regulation, and the JAK/STAT pathway have been reported, including complex genomic rearrangements and diverse JAK2 fusions. Upregulated JAK2 signaling is a consistent finding in nearly all cases, distinguishing PCAETL from other cytotoxic cutaneous T-cell lymphomas. Cases without JAK2 fusions often exhibit gain-of-function mutations in JAK2, STAT3, and STAT5B, alongside loss of negative regulators of the JAK/STAT pathway, particularly SH2B3.[1]

Driver Gene Fusion(s) and Common Partner Genes Molecular Pathogenesis Typical Chromosomal Alteration(s) Prevalence -Common >20%, Recurrent 5-20% or Rare <5% (Disease) Diagnostic, Prognostic, and Therapeutic Significance - D, P, T Established Clinical Significance Per Guidelines - Yes or No (Source) Clinical Relevance Details/Other Notes
JAK2 fusion KHDRBS1-JAK2

PCM1-JAK2

TFG-JAK2

Fusion retains the JAK2 tyrosine kinase domain, tethered to partner oligomerization domains → self-oligo/dimerization → cytokine-independent activation and overactivation of JAK2 signaling Common (~25%), (3/12 patients) D: Identifies a JAK2-deregulated subset; JAK-STAT activation supported by pSTAT3/5 IHC and RNA-seq. T: Preclinical sensitivity to JAK1/2 inhibition (ruxolitinib IC₅₀ ≈ 9–15 nM) and AZD1480; oncogenic activity inhibited by JAK inhibition. Potential therapeutic target with JAK inhibitors.[1]
MYC fusion ACTB-MYC

NPM1-MYC

Fusions involve MYC, a transcriptional regulator driving proliferation. Partner genes (ACTB, NPM1) contribute strong promoters, likely leading to MYC overexpression and deregulated cell-cycle progression. Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients) D: Supports presence of a high-grade proliferative (cell-cycle deregulated) molecular subtype; MYC rearrangements co-occurred with JAK2 fusions Both patients had JAK2 fusions.[1]
ABL1 fusion[2] SELENO1-ABL1 Retained its catalytic tyrosine kinase domain but lost its N-terminal SH2 and SH3 regulatory domains Recurrent (1/6 patients) Potential therapeutic target with Imatinib.[3]
BAZ1A rearrangement[1] None specified Encodes a chromatin-remodeling factor; rearrangements likely cause chromatin dysregulation and transcriptional mis-regulation. The gene is grouped with other drivers of chromatin regulation and cell-cycle control. Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
PTPRC rearrangement[1] None specified Negative regulator of JAK-STAT signaling; rearrangements disrupt this phosphatase, removing inhibition of JAK2 → persistent STAT activation and T-cell proliferation. Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
RB1 rearrangement[1] None specified Tumor suppressor controlling G1/S checkpoint. Recurrent rearrangements likely disrupt RB1, leading to deregulated cell-cycle progression and cooperation with other oncogenic events Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
MTAP rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Common (~25%), (3/12 patients)
SH2B3 rearrangement[1] None specified A negative regulator of JAK2 signaling. Alterations in SH2B3 result in inactivation of this inhibitory adaptor protein. Focal interstitial deletions at 12q24.12 Recurrent (2/12 patients) D: Identifies cases with loss of negative regulation in the JAK-STAT pathway.
CLEC16A rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
PIP4K2A rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
DLEU1 rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
SLC24A2 rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
ABR

rearrangement[1]

None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
GNA14 rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
RHCE rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
RHD rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
DLG2 rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)
FRMD4A rearrangement[1] None specified None specified Structural (inter- or intrachromosomal) rearrangements Recurrent (2/12 patients)


Individual Region Genomic Gain/Loss/LOH

Put your text here and fill in the table (Instructions: Includes aberrations not involving gene rearrangements. Details on clinical significance such as prognosis and other important information can be provided in the notes section. Can refer to CGC workgroup tables as linked on the homepage if applicable. Please include references throughout the table. Do not delete the table.)

Chr # Gain, Loss, Amp, LOH Minimal Region Cytoband and/or Genomic Coordinates [Genome Build; Size] Relevant Gene(s) Diagnostic, Prognostic, and Therapeutic Significance - D, P, T Established Clinical Significance Per Guidelines - Yes or No (Source) Clinical Relevance Details/Other Notes
1 Loss p36.11[1] [4] Unknown Unknown
1 Loss 1p36.22[1] Unknown Unknown
1 Loss 1p36.32-p36.33[1][4] Unknown Unknown
2 Loss q37.3[4] Unknown Unknown
4 Loss q13.2[1] Unknown Unknown
7 Gain q21.11-q22.3[4] Unknown Unknown
7 Gain q22.1[1] Unknown Unknown
7 Gain q32.1-q36.1[4] Unknown Unknown
7 Gain q35[1] Unknown Unknown
7 Gain q36.1-q36.3[1][4] Unknown Unknown
7 Loss p14.1[1] Unknown Unknown
7 Loss q34[1][4] Unknown Unknown
8 Loss p12[4] Unknown Unknown
8 Gain q24.3[4] Unknown Unknown
9 Loss p21.3[1][4] Unknown Unknown The most frequently affected locus, shows losses in the MTAP, CDKN2A, and CDKN2B regions (12/20 patients).[4] It was also the most common in another study (10/12 patients).[1]
10 Loss p11.22[1] Unknown Unknown
11 Loss q23.2[1] Unknown Unknown
12 Loss q24.12[1] Unknown Unknown
13 Loss q14.11[1][4] Unknown Unknown
14 Loss q11.2[1][4] Unknown Unknown
16 Loss p13.13[1] Unknown Unknown
17 Loss p13.2[4] Unknown Unknown
17 Loss p13.3[1] Unknown Unknown No cancer genes.[1]
17 Gain q21.31[4] Unknown Unknown
17 Gain q21.33-q22[1][4] Unknown Unknown
17 Gain q22[1] Unknown Unknown
17 Gain q25.3[4] Unknown Unknown
19 Loss p13.3[1] Unknown Unknown
21 Gain q22.12[4] Unknown Unknown
X Gain p11.23-p11.22[4] Unknown Unknown
X Gain q28[4] Unknown Unknown

All the genes found in these regions are implicated in several pathways associated with lymphoma and tumor development, including T-cell signaling, DNA damage response, the JAK-STAT pathway, and epigenetic modifications.[4]


Characteristic Chromosomal or Other Global Mutational Patterns

Although PCAETL exhibit multiple copy number alterations (CNAs), they lack a distinct signature or genomic profile, as their recurrent CNAs partially or entirely overlap with those found in other aggressive cutaneous T cell lymphomas.[4]

Chromosomal Pattern Molecular Pathogenesis Prevalence -

Common >20%, Recurrent 5-20% or Rare <5% (Disease)

Diagnostic, Prognostic, and Therapeutic Significance - D, P, T Established Clinical Significance Per Guidelines - Yes or No (Source) Clinical Relevance Details/Other Notes

Gene Mutations (SNV/INDEL)

Put your text here and fill in the table (Instructions: This table is not meant to be an exhaustive list; please include only genes/alterations that are recurrent or common as well either disease defining and/or clinically significant. If a gene has multiple mechanisms depending on the type or site of the alteration, add multiple entries in the table. For clinical significance, denote associations with FDA-approved therapy (not an extensive list of applicable drugs) and NCCN or other national guidelines if applicable; Can also refer to CGC workgroup tables as linked on the homepage if applicable as well as any high impact papers or reviews of gene mutations in this entity. Details on clinical significance such as prognosis and other important information such as concomitant and mutually exclusive mutations can be provided in the notes section. Please include references throughout the table. Do not delete the table.)

Gene Genetic Alteration Tumor Suppressor Gene, Oncogene, Other Prevalence -

Common >20%, Recurrent 5-20% or Rare <5% (Disease)

Diagnostic, Prognostic, and Therapeutic Significance - D, P, T   Established Clinical Significance Per Guidelines - Yes or No (Source) Clinical Relevance Details/Other Notes
JAK3; p.R657W, p.M511I Gain-of-function mutations Oncogene Rare (1/12 patients,1/12 patients) Unknown Unknown
JAK2; p.L393V Germline SNV renders JAK2 hypersensitive to cytokine stimulation Oncogene Rare (1/12 patients) Unknown Unknown
STAT3; p.H19R, p.G604A Gain-of-function mutations Oncogene Rare (each 1/12 patients) Unknown Unknown
STAT5B; p.N642H, p.P702S, p.Y665F, p.S434L Gain-of-function mutations Oncogene p.N642H, Recurrent (2 /12)

p.P702S, p.Y665F, p.S434L, Rare (each 1/12 patients)

Unknown Unknown
SH2B3; p.L201Sfs78, p.V35Afs154 Frameshift mutations leading to loss of function Tumor Suppressor Gene (TSG) Rare (each 1/12 patients) Unknown Unknown
SOCS1; p.S71Rfs*14 Frameshift mutation leading to a premature stop codon[1] Tumor Suppressor Gene (TSG) Rare (1/12 patients) Unknown Unknown

Many SNVs and deletions in other genes are also detected and are predicted to be deleterious.[1]

Epigenomic Alterations

Alteration in LIN28, ARID1A, PARP10, MLL3, and MLL5 have been described and may play a role in the pathogenesis.[4]

Genes and Main Pathways Involved

Gene; Genetic Alteration Pathway Pathophysiologic Outcome
JAK2; Fusion JAK-STAT Constitutive activation leading to cytokine-independent cell survival and proliferation. Overactivation of signaling pathways due to self-oligo/dimerization of the chimeric proteins.
SH2B3; Deletion JAK-STAT Loss of negative feedback regulation on JAK2 signaling, resulting in enhanced JAK2 pathway activation.
PTPRC; Deletion JAK-STAT Disruption of negative regulation of the JAK-STAT pathway, contributing to overactivation of JAK2 signaling.
STAT3; SNV JAK-STAT Gain-of-function mutations resulting in enhanced signaling and cell survival.
STAT5; SNV JAK-STAT Gain-of-function mutations leading to overactivation of the pathway, promoting cell proliferation.
MYC; Fusions Cell Cycle Regulation Dysregulation of cell cycle processes, contributing to uncontrolled cell proliferation.
CDKN2A/B; Deletions Cell Cycle Regulation Inactivation of tumor suppressor genes leading to disruptions in cell cycle control.
TP53; Truncating Mutations (nonsense, frameshift) Cell Cycle Regulation Loss of p53 function leading to impaired DNA repair and increased genomic instability.
ARID1A; Deletions Chromatin Regulation Loss of chromatin remodeling activity affecting gene expression and cell growth regulation.
KMT2D; Truncating Mutations Chromatin Regulation Disruption in histone methylation, affecting gene expression and cell differentiation.
NCOR1; Truncating Mutations Chromatin Regulation Loss of corepressor function, leading to altered gene expression and potentially contributing to oncogenesis.[1]


Genetic Diagnostic Testing Methods

Fluorescence In Situ Hybridization (FISH): Detects chromosomal rearrangements and specific gene fusions, such as JAK2 fusions.

Polymerase Chain Reaction (PCR): Amplifies specific regions of DNA to identify genetic alterations, including gene fusions and specific mutations.

Next-Generation Sequencing (NGS): Identifies pathogenic small-scale mutations (SNVs and INDELs) and structural alterations. NGS can analyze multiple genes and pathways simultaneously, which is useful for comprehensive genetic profiling.[1]

Familial Forms

Unknown


Additional Information

  • PCAETL has an aggressive clinical course, with a median survival time of 12 months. The prognosis is similar regardless of whether the morphology is small or large cell, or whether the lesions are localized or diffuse.[5]

This disease is defined/characterized as detailed below:

  • Primary cutaneous CD8-positive aggressive epidermotropic cytotoxic T-cell lymphoma (PCAETL) is a rare and poorly characterized neoplastic proliferation of T lymphocytes with CD8 and cytotoxic molecule expression. PCAETL is marked by epidermal necrosis, a high proliferation index, and aggressive clinical behavior. It should be distinguished from other rare epidermotropic subtypes of cutaneous gamma-delta T-cell lymphomas (such as gamma-delta mycosis fungoides), CD8+ mycosis fungoides, localized pagetoid reticulosis, and type D lymphomatoid papulosis.[5][6][7]

The epidemiology/prevalence of this disease is detailed below:

  • PCAETL is rare, comprising less than 1% of all cutaneous T-cell lymphomas. It typically occurs in adults and shows a predilection for males.[6][7]

The clinical features of this disease are detailed below:

Signs and symptoms - Diffusely distributed papules (common); Localized papules (less common); Ulcerated nodules, tumors, and plaques; Erosion or central necrosis; Preceded by chronic, poorly defined patches (subset); Disseminated to visceral sites (lungs, testes, CNS); Lymph nodes spared; No association with immunosuppression.[5][6][7]

Laboratory findings - None

The sites of involvement of this disease are detailed below:

  • PCAETL can present with either localized or generalized skin lesions and may affect the oral mucosa.[8]

The morphologic features of this disease are detailed below:

  • Pagetoid epithelial involvement (epidermal and adnexal) is typically observed; however, the infiltrate may involve the entire dermis.[7][9] Lymphocyte morphology ranges from monomorphic to pleomorphic. Rimming of subcutaneous fat spaces has been reported. Spongiosis can result in blister formation.[10]
  • The tumor cells typically consist of atypical small to large lymphocytes with indented nuclei, minimal cytoplasm, and occasional immunoblastic features. Histological signs of cytotoxicity are evident, including epidermal necrosis or ulceration, dermal necrosis, karyorrhexis, and rare angiocentric destruction.[5][7][10] Ulceration can resemble pyoderma gangrenosum.[11] There is often pronounced pagetoid epidermotropism, particularly in cases with widespread lesions.[6][12]

The immunophenotype of this disease is detailed below:

  • Positive - CD3, TIA1, granzyme B, perforin, CCR4
  • CD4/CD8 - CD8+/CD4-; rare cases of double positivity or double negativity have been reported
  • CD2/CD5/CD7 - CD2(+/-), CD5(-), CD7(-/+)
  • TCR - TCR-βF1+, rarely TCRγδ+; rare cases of double positive and null type have been reported
  • Ki67 % - >75%
  • Negative - EBER, CD1a, CD30, CD25, ALK1, EMA
  • Variable - CD45RA(+/-), CD15(-/+)[1][2][4]
  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 1.16 1.17 1.18 1.19 1.20 1.21 1.22 1.23 1.24 1.25 1.26 1.27 1.28 1.29 1.30 1.31 1.32 1.33 1.34 1.35 1.36 1.37 1.38 1.39 1.40 1.41 1.42 1.43 1.44 Bastidas Torres, Armando N.; et al. (2022-03-01). "Deregulation of JAK2 signaling underlies primary cutaneous CD8+ aggressive epidermotropic cytotoxic T-cell lymphoma". Haematologica. 107 (3): 702–714. doi:10.3324/haematol.2020.274506. ISSN 1592-8721. PMC 8883537 Check |pmc= value (help). PMID 33792220 Check |pmid= value (help).
  2. 2.0 2.1 Lee, Katie; et al. (2021-12-09). "Primary cytotoxic T-cell lymphomas harbor recurrent targetable alterations in the JAK-STAT pathway". Blood. 138 (23): 2435–2440. doi:10.1182/blood.2021012536. ISSN 1528-0020. PMC 8662071 Check |pmc= value (help). PMID 34432866 Check |pmid= value (help).
  3. Buus, Terkild B.; et al. (2021-12-09). "Oncogenic fusions JAK up CD8+ cytotoxic CTCL". Blood. 138 (23): 2311–2312. doi:10.1182/blood.2021013619. ISSN 0006-4971.
  4. 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 4.12 4.13 4.14 4.15 4.16 4.17 4.18 4.19 4.20 4.21 4.22 4.23 Fanoni, Daniele; et al. (2018-12). "Array‐based CGH of primary cutaneous CD8+ aggressive EPIDERMO‐tropic cytotoxic T‐cell lymphoma". Genes, Chromosomes and Cancer. 57 (12): 622–629. doi:10.1002/gcc.22673. ISSN 1045-2257. Check date values in: |date= (help)
  5. 5.0 5.1 5.2 5.3 Guitart, Joan; et al. (2017-05). "Primary cutaneous aggressive epidermotropic cytotoxic T-cell lymphomas: reappraisal of a provisional entity in the 2016 WHO classification of cutaneous lymphomas". Modern Pathology. 30 (5): 761–772. doi:10.1038/modpathol.2016.240. Check date values in: |date= (help)
  6. 6.0 6.1 6.2 6.3 Berti, Emilio; et al. (1999-08). "Primary Cutaneous CD8-Positive Epidermotropic Cytotoxic T Cell Lymphomas". The American Journal of Pathology. 155 (2): 483–492. doi:10.1016/S0002-9440(10)65144-9. Check date values in: |date= (help)
  7. 7.0 7.1 7.2 7.3 7.4 Robson, Alistair; et al. (2015-10). "Aggressive epidermotropic cutaneous CD 8 + lymphoma: a cutaneous lymphoma with distinct clinical and pathological features. Report of an EORTC Cutaneous Lymphoma Task Force Workshop". Histopathology. 67 (4): 425–441. doi:10.1111/his.12371. ISSN 0309-0167. Check date values in: |date= (help)
  8. Travassos, Daphine Caxias; et al. (2022-06). "Primary cutaneous CD8 + cytotoxic T‐cell lymphoma of the face with intraoral involvement, resulting in facial nerve palsy after chemotherapy". Journal of Cutaneous Pathology. 49 (6): 560–564. doi:10.1111/cup.14199. ISSN 0303-6987. Check date values in: |date= (help)
  9. Saruta, Hiroshi; et al. (2017-09). "Hematopoietic stem cell transplantation in advanced cutaneous T‐cell lymphoma". The Journal of Dermatology. 44 (9): 1038–1042. doi:10.1111/1346-8138.13848. ISSN 0385-2407. Check date values in: |date= (help)
  10. 10.0 10.1 Nofal, Ahmad; et al. (2012-10). "Primary cutaneous aggressive epidermotropic CD8+ T-cell lymphoma: Proposed diagnostic criteria and therapeutic evaluation". Journal of the American Academy of Dermatology. 67 (4): 748–759. doi:10.1016/j.jaad.2011.07.043. Check date values in: |date= (help)
  11. Deenen, N.J.; et al. (2019-02). "Pitfalls in diagnosing primary cutaneous aggressive epidermotropic CD 8 + T‐cell lymphoma". British Journal of Dermatology. 180 (2): 411–412. doi:10.1111/bjd.17252. ISSN 0007-0963. Check date values in: |date= (help)
  12. Willemze, R. (2005-05-15). "WHO-EORTC classification for cutaneous lymphomas". Blood. 105 (10): 3768–3785. doi:10.1182/blood-2004-09-3502. ISSN 0006-4971.